Transcript: ENST00000377636.3 TBC1D4-001

Description

TBC1 domain family, member 4 [Source:HGNC Symbol;Acc:19165]

Gene Synonyms

AS160, DKFZp779C0666, KIAA0603

Location

Chromosome 13: 75,858,808-76,056,250 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 27 domains and features, is associated with 81343 variant alleles and maps to 738 oligo probes.

Gene

This transcript is a product of gene ENSG00000136111.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377636.3	TBC1D4-001	6364	1298aa	ENSP00000366863.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41901	O60343	NM_014832.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431480.2	TBC1D4-203	6339	1290aa	ENSP00000395986.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS66564	O60343	NM_001286658.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425511.1	TBC1D4-202	6204	462aa	ENSP00000390654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O60343	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377625.2	TBC1D4-201	6174	1235aa	ENSP00000366852.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS66563	O60343 Q5JU47	NM_001286659.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413735.1	TBC1D4-004	847	282aa	ENSP00000396932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JU47	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000478591.1	TBC1D4-002	759	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493487.1	TBC1D4-005	458	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488955.1	TBC1D4-003	336	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 6,364 bps, Translation length: 1,298 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60343

CCDS

This transcript is a member of the Human CCDS set: CCDS41901

Version

ENST00000377636.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000045283 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000377636.3 TBC1D4-001

Summary