Transcript: ENST00000448904.2 LECT1-003

Description

leukocyte cell derived chemotaxin 1 [Source:HGNC Symbol;Acc:17005]

Gene Synonyms

BRICD3, CHM-I, CHM1, CHMI, MYETS1, chondromodulin

Location

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 14449 variant alleles and maps to 307 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377962.3	LECT1-001	1410	334aa	ENSP00000367198.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9437	E9PKI9 O75829	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448904.2	LECT1-003	1444	333aa	ENSP00000388576.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45051	E9PKI9 O75829	NM_007015.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431550.1	LECT1-002	731	129aa	ENSP00000396035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKI9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,444 bps, Translation length: 333 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75829

CCDS

This transcript is a member of the Human CCDS set: CCDS45051

Version

ENST00000448904.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000393667 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.