Transcript: ENST00000537435.2 USP44-002

Description

ubiquitin specific peptidase 44 [Source:HGNC Symbol;Acc:20064]

Gene Synonyms

FLJ14528

Location

Chromosome 12: 95,911,930-95,942,048 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 17 domains and features, is associated with 13947 variant alleles and maps to 327 oligo probes.

Gene

This transcript is a product of gene ENSG00000136014.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000258499.3	USP44-001	4022	712aa	ENSP00000258499.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9053	F8VRW0 F8VVD6 Q9H0E7	NM_032147.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000393091.2	USP44-004	3161	712aa	ENSP00000376806.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9053	F8VRW0 F8VVD6 Q9H0E7	NM_001042403.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537435.2	USP44-002	2499	712aa	ENSP00000442629.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9053	F8VRW0 F8VVD6 Q9H0E7	NM_001278393.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552440.1	USP44-003	1818	496aa	ENSP00000448670.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VRI7 F8VRW0 F8VVD6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549639.1	USP44-005	677	111aa	ENSP00000449635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VVD6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551837.1	USP44-007	666	164aa	ENSP00000448601.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VRW0 F8VVD6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000547951.1	USP44-006	685	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000552237.1	USP44-008	463	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,499 bps, Translation length: 712 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H0E7

CCDS

This transcript is a member of the Human CCDS set: CCDS9053

Version

ENST00000537435.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000408315 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000537435.2 USP44-002

Summary