Transcript: ENST00000444078.1 GPR55-002

Description

G protein-coupled receptor 55 [Source:HGNC Symbol;Acc:4511]

Location

About this transcript

This transcript has 3 exons, is annotated with 21 domains and features, is associated with 7709 variant alleles and maps to 345 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392040.1	GPR55-201	3828	319aa	ENSP00000375894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2480	A8K858 C9J1P7 Q9Y2T6	NM_005683.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392039.2	GPR55-001	1523	319aa	ENSP00000375893.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2480	A8K858 C9J1P7 Q9Y2T6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438398.1	GPR55-003	919	242aa	ENSP00000412768.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1P7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000444078.1	GPR55-002	2527	319aa	ENSP00000410267.1	Nonsense mediated decay	CCDS2480	A8K858 C9J1P7 Q9Y2T6	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 2,527 bps, Translation length: 319 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y2T6

CCDS

This transcript is a member of the Human CCDS set: CCDS2480

Version

ENST00000444078.1

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256959 (version 1)