Transcript: ENST00000563804.1 BCMO1-002

Description

beta-carotene 15,15'-monooxygenase 1 [Source:HGNC Symbol;Acc:13815]

Gene Synonyms

BCDO, BCDO1, BCMO, BCO, BCO1, FLJ10730

Location

About this transcript

This transcript has 10 exons, is annotated with 3 domains and features, is associated with 29955 variant alleles and maps to 404 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000258168.2	BCMO1-001	2670	547aa	ENSP00000258168.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10934	Q9HAY6	NM_017429.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425577.2	BCMO1-201	1857	478aa	ENSP00000400586.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EM88	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564552.1	BCMO1-003	949	162aa	ENSP00000455219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPA2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563804.1	BCMO1-002	1857	81aa	ENSP00000457910.1	Nonsense mediated decay		H3BV18	-	-

Summary

Statistics

Exons: 10, Coding exons: 3, Transcript length: 1,857 bps, Translation length: 81 residues

Version

ENST00000563804.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000432297 (version 1)