Transcript: ENST00000553113.1 PPP1R1A-004

Description

protein phosphatase 1, regulatory (inhibitor) subunit 1A [Source:HGNC Symbol;Acc:9286]

Gene Synonyms

I1, IPP1

Location

About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 1785 variant alleles and maps to 173 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000257905.8	PPP1R1A-001	1826	171aa	ENSP00000257905.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44912	Q13522	NM_006741.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547431.1	PPP1R1A-003	2491	153aa	ENSP00000473304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GMQ8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553113.1	PPP1R1A-004	547	90aa	ENSP00000450178.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000547826.2	PPP1R1A-005	571	64aa	ENSP00000448559.1	Nonsense mediated decay		F8VR76	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 547 bps, Translation length: 90 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000553113.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000406605 (version 1)