Transcript: ENST00000548898.1 CD63-011

Description

CD63 molecule [Source:HGNC Symbol;Acc:1692]

Gene Synonyms

LAMP-3, ME491, MLA1, OMA81H, TSPAN30

Location

Chromosome 12: 56,119,107-56,120,892 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 1024 variant alleles and maps to 326 oligo probes.

Gene

This transcript is a product of gene ENSG00000135404.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000549117.1	CD63-001	1233	238aa	ENSP00000447730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8890	F8VNT9 F8VV56 F8VWK8 F8W022 P08962	NM_001257389.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000257857.4	CD63-002	1070	238aa	ENSP00000257857.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8890	F8VNT9 F8VV56 F8VWK8 F8W022 P08962	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420846.3	CD63-201	1008	236aa	ENSP00000393502.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JV86 F8VNT9 F8W022	NM_001780.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552692.1	CD63-003	949	238aa	ENSP00000449337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8890	F8VNT9 F8VV56 F8VWK8 F8W022 P08962	NM_001257391.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550776.1	CD63-010	870	156aa	ENSP00000448091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58242	F8VV56 P08962	NM_001257401.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552164.1	CD63-007	845	217aa	ENSP00000449281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VNT9 F8VWK8 F8W022	NM_001267698.1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000551173.1	CD63-008	788	215aa	ENSP00000446752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VNT9 F8W022	NM_001257390.1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000546939.1	CD63-009	779	156aa	ENSP00000447356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58242	F8VV56 P08962	NM_001257400.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548898.1	CD63-011	727	145aa	ENSP00000447938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VV56	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552754.1	CD63-004	682	215aa	ENSP00000446807.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58243	F8VV56 P08962	NM_001257392.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548160.1	CD63-014	648	145aa	ENSP00000449654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VV56	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552067.1	CD63-012	621	145aa	ENSP00000449684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VV56	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546457.1	CD63-006	607	133aa	ENSP00000450191.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VNT9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000550050.1	CD63-013	829	110aa	ENSP00000449435.1	Nonsense mediated decay		F8VX62	-	-
ENST00000548117.1	CD63-015	499	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555199.1	CD63-016	230	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 727 bps, Translation length: 145 residues

Version

ENST00000548898.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000409488 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000548898.1 CD63-011

Summary