Transcript: ENST00000394349.3 ATP5G2-003

Description

ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842]

Gene Synonyms

ATP5A

Location

Chromosome 12: 54,058,950-54,070,109 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 5859 variant alleles and maps to 450 oligo probes.

Gene

This transcript is a product of gene ENSG00000135390.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394349.3	ATP5G2-003	878	198aa	ENSP00000377878.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8863	Q06055	NM_005176.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000338662.5	ATP5G2-002	1792	157aa	ENSP00000340315.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31812	Q06055	NM_001002031.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549164.1	ATP5G2-006	745	141aa	ENSP00000447317.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q06055	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000602871.1	ATP5G2-010	668	141aa	ENSP00000473535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q06055	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000552242.1	ATP5G2-004	1950	23aa	ENSP00000448801.1	Nonsense mediated decay		F8VXQ8	-	-
ENST00000549748.1	ATP5G2-007	728	33aa	ENSP00000447643.1	Nonsense mediated decay		F8W041	-	-
ENST00000550241.1	ATP5G2-009	406	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495596.1	ATP5G2-001	1976	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000552120.1	ATP5G2-008	511	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 878 bps, Translation length: 198 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q06055

CCDS

This transcript is a member of the Human CCDS set: CCDS8863

Version

ENST00000394349.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257312 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000394349.3 ATP5G2-003

Summary