Transcript: ENST00000468486.2 ORC3-002

Description

origin recognition complex, subunit 3 [Source:HGNC Symbol;Acc:8489]

Gene Synonyms

IMAGE50150, LAT, LATHEO, ORC3L

Location

Chromosome 6: 88,299,848-88,305,155 forward strand.

About this transcript

This transcript has 4 exons, is associated with 2277 variant alleles and maps to 104 oligo probes.

Gene

This transcript is a product of gene ENSG00000135336.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000257789.4	ORC3-004	2501	712aa	ENSP00000257789.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5012	Q9UBD5 U3KQL3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392844.3	ORC3-001	2512	711aa	ENSP00000376586.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43486	Q9UBD5 U3KQL3	NM_181837.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546266.1	ORC3-202	2106	568aa	ENSP00000444695.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56440	Q9UBD5 U3KQL3	NM_001197259.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417380.2	ORC3-201	2050	444aa	ENSP00000390176.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DZ51	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508875.1	ORC3-005	562	32aa	ENSP00000475988.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQL3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000478028.1	ORC3-003	588	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468486.2	ORC3-002	471	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 471 bps,

Version

ENST00000468486.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000041453 (version 2)

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Transcript: ENST00000468486.2 ORC3-002

Summary