Transcript: ENST00000546639.1 SDS-004

Description

serine dehydratase [Source:HGNC Symbol;Acc:10691]

Gene Synonyms

SDH

Location

Chromosome 12: 113,836,642-113,841,691 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 2275 variant alleles and maps to 116 oligo probes.

Gene

This transcript is a product of gene ENSG00000135094.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000257549.4	SDS-001	1606	328aa	ENSP00000257549.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9169	P20132	NM_006843.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547342.1	SDS-006	736	235aa	ENSP00000449061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VXS0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000552280.1	SDS-005	412	97aa	ENSP00000449833.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VW93	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000553112.1	SDS-002	1299	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546639.1	SDS-004	589	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546785.1	SDS-003	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 589 bps,

Version

ENST00000546639.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000404793 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000546639.1 SDS-004

Summary