Transcript: ENST00000256495.3 BHLHE40-001

Description

basic helix-loop-helix family, member e40 [Source:HGNC Symbol;Acc:1046]

Gene Synonyms

BHLHB2, DEC1, HLHB2, SHARP-2, SHARP2, STRA13, Stra14, bHLHe40

Location

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 3625 variant alleles and maps to 438 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000256495.3	BHLHE40-001	3473	412aa	ENSP00000256495.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2565	O14503 Q6IB83	NM_003670.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467610.1	BHLHE40-002	1366	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460806.1	BHLHE40-003	396	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,473 bps, Translation length: 412 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O14503

CCDS

This transcript is a member of the Human CCDS set: CCDS2565

Version

ENST00000256495.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000239244 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.