Transcript: ENST00000554332.1 EIF2S1-001

Description

eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa [Source:HGNC Symbol;Acc:3265]

Gene Synonyms

EIF-2, EIF-2A, EIF-2alpha, EIF2, EIF2A

Location

Chromosome 14: 67,849,128-67,850,385 forward strand.

About this transcript

This transcript has 2 exons, is associated with 593 variant alleles and maps to 263 oligo probes.

Gene

This transcript is a product of gene ENSG00000134001.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000256383.4	EIF2S1-003	4485	315aa	ENSP00000256383.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9781	G3V4T5 P05198 Q53XC0	NM_004094.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466499.2	EIF2S1-004	2390	315aa	ENSP00000425299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9781	G3V4T5 P05198 Q53XC0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557310.1	EIF2S1-006	999	273aa	ENSP00000451975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4T5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555876.1	EIF2S1-002	783	252aa	ENSP00000452034.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554332.1	EIF2S1-001	534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556724.1	EIF2S1-007	527	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 534 bps,

Version

ENST00000554332.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000412546 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000554332.1 EIF2S1-001

Summary