Transcript: ENST00000256383.4 EIF2S1-003

Description

eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa [Source:HGNC Symbol;Acc:3265]

Gene Synonyms

EIF-2, EIF-2A, EIF-2alpha, EIF2, EIF2A

Location

Chromosome 14: 67,826,714-67,853,233 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 15 domains and features, is associated with 11109 variant alleles and maps to 690 oligo probes.

Gene

This transcript is a product of gene ENSG00000134001.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000256383.4	EIF2S1-003	4485	315aa	ENSP00000256383.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9781	G3V4T5 P05198 Q53XC0	NM_004094.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466499.2	EIF2S1-004	2390	315aa	ENSP00000425299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9781	G3V4T5 P05198 Q53XC0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557310.1	EIF2S1-006	999	273aa	ENSP00000451975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4T5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000555876.1	EIF2S1-002	783	252aa	ENSP00000452034.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554332.1	EIF2S1-001	534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556724.1	EIF2S1-007	527	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 4,485 bps, Translation length: 315 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P05198

CCDS

This transcript is a member of the Human CCDS set: CCDS9781

Version

ENST00000256383.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000074342 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000256383.4 EIF2S1-003

Summary