Transcript: ENST00000320982.3 SEC14L4-004

Description

SEC14-like 4 (S. cerevisiae) [Source:HGNC Symbol;Acc:20627]

Gene Synonyms

TAP3, dJ130H16.5

Location

Chromosome 22: 30,884,900-30,901,698 reverse strand.

About this transcript

This transcript has 12 exons, is associated with 7771 variant alleles and maps to 599 oligo probes.

Gene

This transcript is a product of gene ENSG00000133488.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000255858.7	SEC14L4-001	2499	406aa	ENSP00000255858.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13878	B2RMR2 Q6ICM2 Q9UDX3	NM_174977.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392772.2	SEC14L4-201	2575	360aa	ENSP00000376525.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KSF0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540456.1	SEC14L4-202	2564	391aa	ENSP00000440848.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1L4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381982.3	SEC14L4-002	1603	360aa	ENSP00000371412.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54517	Q9UDX3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000320982.3	SEC14L4-004	2575	38aa	ENSP00000314163.3	Nonsense mediated decay		D7F472	-	-
ENST00000321205.5	SEC14L4-003	2564	93aa	ENSP00000317617.5	Nonsense mediated decay		F8WEM2	-	-

Summary

Statistics

Exons: 12, Coding exons: 2, Transcript length: 2,575 bps, Translation length: 38 residues

Version

ENST00000320982.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000321949 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000320982.3 SEC14L4-004

Summary