Transcript: ENST00000460956.1 SUV420H2-006

Description

suppressor of variegation 4-20 homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:28405]

Gene Synonyms

KMT5C, MGC2705

Location

Chromosome 19: 55,853,986-55,858,043 forward strand.

About this transcript

This transcript has 6 exons, is associated with 2313 variant alleles and maps to 168 oligo probes.

Gene

This transcript is a product of gene ENSG00000133247.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000255613.3	SUV420H2-001	2308	462aa	ENSP00000255613.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12922	Q86Y97	NM_032701.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445196.1	SUV420H2-002	2077	97aa	ENSP00000397296.1	Nonsense mediated decay		Q86Y97	-	-
ENST00000592631.1	SUV420H2-010	869	97aa	ENSP00000467499.1	Nonsense mediated decay		Q86Y97	-	-
ENST00000402499.4	SUV420H2-008	888	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460956.1	SUV420H2-006	637	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587442.1	SUV420H2-009	464	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464185.1	SUV420H2-005	2235	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589338.1	SUV420H2-011	1601	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474492.1	SUV420H2-007	726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498738.1	SUV420H2-003	713	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468951.1	SUV420H2-004	661	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 637 bps,

Version

ENST00000460956.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000318314 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

low sequence quality

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Favourite species

All species

Recent locations

Transcript: ENST00000460956.1 SUV420H2-006

Summary