Transcript: ENST00000255608.4 BTBD2-001

Description

BTB (POZ) domain containing 2 [Source:HGNC Symbol;Acc:15504]

Location

Chromosome 19: 1,985,447-2,015,719 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 11 domains and features, is associated with 18859 variant alleles and maps to 423 oligo probes.

Gene

This transcript is a product of gene ENSG00000133243.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000255608.4	BTBD2-001	2635	525aa	ENSP00000255608.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12078	Q6NT96 Q9BX70	NM_017797.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587825.1	BTBD2-011	961	321aa	ENSP00000467113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000589200.1	BTBD2-007	1219	97aa	ENSP00000466686.1	Nonsense mediated decay		K7EMW9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000590646.1	BTBD2-004	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000587742.1	BTBD2-005	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000588395.1	BTBD2-006	352	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000592082.1	BTBD2-010	248	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000592895.1	BTBD2-003	2753	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589685.1	BTBD2-002	2411	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000587225.1	BTBD2-008	1070	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,635 bps, Translation length: 525 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BX70

CCDS

This transcript is a member of the Human CCDS set: CCDS12078

Version

ENST00000255608.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000449300 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000255608.4 BTBD2-001

Summary