Transcript: ENST00000255192.3 BHMT2-001

Description

betaine--homocysteine S-methyltransferase 2 [Source:HGNC Symbol;Acc:1048]

Location

Chromosome 5: 78,365,540-78,385,289 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 8 domains and features, is associated with 8241 variant alleles and maps to 488 oligo probes.

Gene

This transcript is a product of gene ENSG00000132840.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000255192.3	BHMT2-001	2050	363aa	ENSP00000255192.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4045	E5RH96 Q9H2M3	NM_017614.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521567.1	BHMT2-002	1537	299aa	ENSP00000430278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54871	Q9H2M3	NM_001178005.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518666.1	BHMT2-003	524	68aa	ENSP00000428640.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RH96	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519743.1	BHMT2-005	578	58aa	ENSP00000430155.1	Nonsense mediated decay		E5RGH5	-	-
ENST00000523472.1	BHMT2-006	702	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000523046.1	BHMT2-007	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518758.1	BHMT2-004	528	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,050 bps, Translation length: 363 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H2M3

CCDS

This transcript is a member of the Human CCDS set: CCDS4045

Version

ENST00000255192.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000226962 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000255192.3 BHMT2-001

Summary