Transcript: ENST00000378392.1 ANKEF1-002

Description

ankyrin repeat and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:15803]

Gene Synonyms

ANKRD5, FLJ21669, dJ839B4.6

Location

About this transcript

This transcript has 11 exons, is annotated with 36 domains and features, is associated with 9013 variant alleles and maps to 434 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378380.3	ANKEF1-001	3762	776aa	ENSP00000367631.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13108	Q9NU02	NM_198798.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378392.1	ANKEF1-002	2894	776aa	ENSP00000367644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13108	Q9NU02	NM_022096.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488991.1	ANKEF1-003	2805	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000437504.1	ANKEF1-004	489	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 2,894 bps, Translation length: 776 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NU02

CCDS

This transcript is a member of the Human CCDS set: CCDS13108

Version

ENST00000378392.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000077969 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.