Transcript: ENST00000394908.4 FLOT2-003

Description

flotillin 2 [Source:HGNC Symbol;Acc:3758]

Gene Synonyms

ECS-1, ECS1, ESA, ESA1, M17S1

Location

Chromosome 17: 27,206,353-27,224,697 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 6 domains and features, is associated with 8272 variant alleles and maps to 524 oligo probes.

Gene

This transcript is a product of gene ENSG00000132589.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394908.4	FLOT2-003	2618	428aa	ENSP00000378368.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11245	Q14254 Q6FG43	NM_004475.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394906.2	FLOT2-001	2756	483aa	ENSP00000378366.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EMK3 Q6FG43	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000585169.1	FLOT2-006	2585	428aa	ENSP00000463503.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QLD9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465427.3	FLOT2-009	746	249aa	ENSP00000465819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000580805.1	FLOT2-002	2679	118aa	ENSP00000463304.1	Nonsense mediated decay		J3QKZ4	-	-
ENST00000586827.2	FLOT2-013	1069	68aa	ENSP00000465022.1	Nonsense mediated decay		K7EJ47	-	-
ENST00000577789.1	FLOT2-004	2503	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000584569.1	FLOT2-011	266	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000593158.1	FLOT2-012	752	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000582174.1	FLOT2-007	703	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000580313.1	FLOT2-008	429	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000581509.1	FLOT2-010	426	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,618 bps, Translation length: 428 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14254

CCDS

This transcript is a member of the Human CCDS set: CCDS11245

Version

ENST00000394908.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000255935 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000394908.4 FLOT2-003

Summary