Transcript: ENST00000504352.1 PCBD2-005

Description

pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 [Source:HGNC Symbol;Acc:24474]

Gene Synonyms

DCOH2, DCOHM, PHS2

Location

About this transcript

This transcript has 8 exons, is annotated with 6 domains and features, is associated with 42688 variant alleles and maps to 308 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000512783.1	PCBD2-002	5621	130aa	ENSP00000421544.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43364	H0YA52 Q9H0N5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000254908.6	PCBD2-001	1223	130aa	ENSP00000254908.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43364	H0YA52 Q9H0N5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504352.1	PCBD2-005	961	119aa	ENSP00000426161.1	Nonsense mediated decay		H0YA52	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000510013.1	PCBD2-004	361	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 4, Transcript length: 961 bps, Translation length: 119 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000504352.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000371581 (version 1)