Transcript: ENST00000464828.1 SLC6A11-003

Description

solute carrier family 6 (neurotransmitter transporter), member 11 [Source:HGNC Symbol;Acc:11044]

Gene Synonyms

GABT3, GAT-3, GAT3, GAT4

Location

About this transcript

This transcript has 2 exons, is associated with 729 variant alleles and maps to 159 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000254488.2	SLC6A11-001	4296	632aa	ENSP00000254488.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2602	P48066 Q8IYC9	NM_014229.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454147.1	SLC6A11-002	2794	208aa	ENSP00000404120.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IYC9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464828.1	SLC6A11-003	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 570 bps,

Version

ENST00000464828.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000340196 (version 1)