Transcript: ENST00000254488.2 SLC6A11-001

Description

solute carrier family 6 (neurotransmitter transporter), member 11 [Source:HGNC Symbol;Acc:11044]

Gene Synonyms

GABT3, GAT-3, GAT3, GAT4

Location

About this transcript

This transcript has 14 exons, is annotated with 30 domains and features, is associated with 52845 variant alleles and maps to 757 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000254488.2	SLC6A11-001	4296	632aa	ENSP00000254488.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2602	P48066 Q8IYC9	NM_014229.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454147.1	SLC6A11-002	2794	208aa	ENSP00000404120.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IYC9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464828.1	SLC6A11-003	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 4,296 bps, Translation length: 632 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P48066

CCDS

This transcript is a member of the Human CCDS set: CCDS2602

Version

ENST00000254488.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251927 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.