Transcript: ENST00000478482.1 MATN3-002

Description

matrilin 3 [Source:HGNC Symbol;Acc:6909]

Gene Synonyms

DIPOA, EDM5, HOA, OADIP, OS2

Location

About this transcript

This transcript has 2 exons, is associated with 1331 variant alleles and maps to 123 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000407540.3	MATN3-001	2524	486aa	ENSP00000383894.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46226	O15232	NM_002381.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421259.2	MATN3-201	1443	444aa	ENSP00000398753.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B2CPU0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478482.1	MATN3-002	793	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 793 bps,

Version

ENST00000478482.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000323926 (version 1)