Transcript: ENST00000561414.1 CHSY1-003

Description

chondroitin sulfate synthase 1 [Source:HGNC Symbol;Acc:17198]

Gene Synonyms

CHSY, CSS1, ChSy-1, KIAA0990, TPBS

Location

About this transcript

This transcript has 2 exons, is associated with 4540 variant alleles and maps to 43 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000254190.3	CHSY1-001	4550	802aa	ENSP00000254190.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10390	Q86X52	NM_014918.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543813.1	CHSY1-002	1949	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561143.1	CHSY1-004	819	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000561414.1	CHSY1-003	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560766.1	CHSY1-005	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559384.1	CHSY1-006	139	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 564 bps,

Version

ENST00000561414.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000415771 (version 1)