Transcript: ENST00000579000.1 PPP1R1B-008

Description

protein phosphatase 1, regulatory (inhibitor) subunit 1B [Source:HGNC Symbol;Acc:9287]

Gene Synonyms

DARPP-32, DARPP32, FLJ20940

Location

Chromosome 17: 37,783,453-37,792,875 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 4195 variant alleles and maps to 316 oligo probes.

Gene

This transcript is a product of gene ENSG00000131771.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000254079.4	PPP1R1B-001	1845	204aa	ENSP00000254079.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11339	B3KVQ9 Q9NNW1 Q9UD71	NM_032192.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394267.2	PPP1R1B-002	1504	168aa	ENSP00000377810.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11340	Q9NNW1 Q9UD71	NM_181505.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579000.1	PPP1R1B-008	1466	171aa	ENSP00000462841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KT77 Q9NNW1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394265.1	PPP1R1B-005	1419	168aa	ENSP00000377808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11340	Q9NNW1 Q9UD71	NM_001242464.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580825.1	PPP1R1B-013	1038	204aa	ENSP00000462137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11339	B3KVQ9 Q9NNW1 Q9UD71	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000582680.1	PPP1R1B-014	875	144aa	ENSP00000462522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSJ8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000580029.1	PPP1R1B-007	2879	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492037.1	PPP1R1B-006	1291	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000580772.1	PPP1R1B-011	746	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000583446.1	PPP1R1B-012	584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,466 bps, Translation length: 171 residues

Version

ENST00000579000.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000444881 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000579000.1 PPP1R1B-008

Summary