Transcript: ENST00000377442.2 CA6-006

Description

carbonic anhydrase VI [Source:HGNC Symbol;Acc:1380]

Gene Synonyms

CA-VI, GUSTIN

Location

Chromosome 1: 9,005,946-9,034,763 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 14017 variant alleles and maps to 357 oligo probes.

Gene

This transcript is a product of gene ENSG00000131686.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377436.3	CA6-005	942	313aa	ENSP00000366654.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57970	P23280	NM_001270500.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480186.3	CA6-002	1493	179aa	ENSP00000435280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N4G4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377443.2	CA6-001	1319	308aa	ENSP00000366662.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30578	B4DUH8 P23280	NM_001215.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000377442.2	CA6-006	747	248aa	ENSP00000366661.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57971	P23280	NM_001270501.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549778.1	CA6-007	582	187aa	ENSP00000447108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W148	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000476083.1	CA6-003	787	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 747 bps, Translation length: 248 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P23280

CCDS

This transcript is a member of the Human CCDS set: CCDS57971

Version

ENST00000377442.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000407380 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000377442.2 CA6-006

Summary