Transcript: ENST00000588033.1 AOC3-005

Description

amine oxidase, copper containing 3 [Source:HGNC Symbol;Acc:550]

Gene Synonyms

HPAO, SSAO, VAP-1, VAP1

Location

Chromosome 17: 41,006,144-41,007,539 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 731 variant alleles and maps to 70 oligo probes.

Gene

This transcript is a product of gene ENSG00000131471.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000308423.2	AOC3-001	4026	763aa	ENSP00000312326.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11444	K7EL47 K7EQZ5 K7ESB3 Q16853 Q9UEU7	NM_003734.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000591562.1	AOC3-002	2522	220aa	ENSP00000468632.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62198	K7EL47 K7EQZ5 K7ESB3 Q9UEU7	NM_001277732.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592999.1	AOC3-004	573	152aa	ENSP00000465913.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EL47 K7EQZ5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000588033.1	AOC3-005	542	112aa	ENSP00000468043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQZ5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587330.1	AOC3-003	545	144aa	ENSP00000464787.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 542 bps, Translation length: 112 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000588033.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000452448 (version 1)

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Transcript: ENST00000588033.1 AOC3-005

Summary