Transcript: ENST00000426925.1 SH3BP5-002

Description

SH3-domain binding protein 5 (BTK-associated) [Source:HGNC Symbol;Acc:10827]

Gene Synonyms

SAB, SH3BP-5, Sab

Location

Chromosome 3: 15,297,096-15,374,696 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 6 domains and features, is associated with 34986 variant alleles and maps to 427 oligo probes.

Gene

This transcript is a product of gene ENSG00000131370.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000383791.3	SH3BP5-001	2822	455aa	ENSP00000373301.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2625	B2R7Y8 C9JK30 C9JNW0 O60239 Q6MZG3	NM_004844.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426925.1	SH3BP5-002	2190	298aa	ENSP00000388553.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43055	C9JK30 C9JNW0 O60239 Q6MZG3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000253688.5	SH3BP5-201	2017	298aa	ENSP00000253688.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43055	C9JK30 C9JNW0 O60239 Q6MZG3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000408919.3	SH3BP5-004	1880	298aa	ENSP00000386231.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43055	C9JK30 C9JNW0 O60239 Q6MZG3	NM_001018009.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366391.2	SH3BP5-009	903	128aa	ENSP00000394115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JK30 C9JNW0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000417936.1	SH3BP5-008	826	51aa	ENSP00000408246.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JNW0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000412806.1	SH3BP5-003	1900	57aa	ENSP00000400128.1	Nonsense mediated decay		C9J140	-	-
ENST00000450625.1	SH3BP5-005	763	69aa	ENSP00000389484.1	Nonsense mediated decay		F8WDU8	-	-
ENST00000465894.2	SH3BP5-007	532	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459627.1	SH3BP5-006	473	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 6, Transcript length: 2,190 bps, Translation length: 298 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60239

CCDS

This transcript is a member of the Human CCDS set: CCDS43055

Version

ENST00000426925.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000340741 (version 12)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000426925.1 SH3BP5-002

Summary