Transcript: ENST00000253462.3 GINS2-001

Description

GINS complex subunit 2 (Psf2 homolog) [Source:HGNC Symbol;Acc:24575]

Gene Synonyms

HSPC037, PSF2, Pfs2

Location

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 8860 variant alleles and maps to 403 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000253462.3	GINS2-001	2673	185aa	ENSP00000253462.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10953	M0QXS3 M0R043 Q9Y248	NM_016095.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000595355.1	GINS2-003	625	69aa	ENSP00000470984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXS3 M0R043	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000596233.1	GINS2-004	537	51aa	ENSP00000469346.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXS3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,673 bps, Translation length: 185 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y248

CCDS

This transcript is a member of the Human CCDS set: CCDS10953

Version

ENST00000253462.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000269098 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.