Transcript: ENST00000599829.1 UBE2M-003

Description

ubiquitin-conjugating enzyme E2M [Source:HGNC Symbol;Acc:12491]

Gene Synonyms

UBC-RS2, UBC12, hUbc12

Location

About this transcript

This transcript has 2 exons, is associated with 318 variant alleles and maps to 290 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000253023.3	UBE2M-001	1508	183aa	ENSP00000253023.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12987	M0QX69 P61081	NM_003969.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000595957.1	UBE2M-006	734	69aa	ENSP00000468940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QX69	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000596985.1	UBE2M-005	349	114aa	ENSP00000469855.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QYI6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000599829.1	UBE2M-003	447	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000593801.1	UBE2M-004	323	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 447 bps,

Version

ENST00000599829.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000467100 (version 1)