Transcript: ENST00000444139.1 FIBCD1-003

Description

fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:25922]

Gene Synonyms

FLJ14810

Location

Chromosome 9: 133,777,827-133,805,366 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 14748 variant alleles and maps to 350 oligo probes.

Gene

This transcript is a product of gene ENSG00000130720.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372338.4	FIBCD1-001	3253	461aa	ENSP00000361413.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6937	A3KFJ8 A7YSM1 Q8N539	NM_032843.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448616.1	FIBCD1-202	3119	461aa	ENSP00000414501.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6937	A3KFJ8 A7YSM1 Q8N539	NM_001145106.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444139.1	FIBCD1-003	2440	310aa	ENSP00000395319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4X0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000372337.2	FIBCD1-002	1868	303aa	ENSP00000361412.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A3KFJ8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000253018.4	FIBCD1-201	1316	198aa	ENSP00000253018.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4X0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451466.1	FIBCD1-004	1046	289aa	ENSP00000393894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000486250.1	FIBCD1-006	449	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463475.1	FIBCD1-005	385	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,440 bps, Translation length: 310 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000444139.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000054689 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000444139.1 FIBCD1-003

Summary