Transcript: ENST00000467148.1 HELZ2-003

Description

helicase with zinc finger 2, transcriptional coactivator [Source:HGNC Symbol;Acc:30021]

Gene Synonyms

KIAA1769, PDIP-1, PDIP1, PRIC285

Location

Chromosome 20: 62,190,555-62,203,808 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 31 domains and features, is associated with 9927 variant alleles and maps to 583 oligo probes.

Gene

This transcript is a product of gene ENSG00000130589.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000467148.1	HELZ2-003	8064	2649aa	ENSP00000417401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33508	Q3C1U4 Q9BYK8	NM_001037335.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427522.2	HELZ2-001	7827	2080aa	ENSP00000393257.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13527	Q9BYK8	NM_033405.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479540.1	HELZ2-005	3079	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478861.1	HELZ2-002	833	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000454223.1	HELZ2-006	435	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000370082.1	HELZ2-004	1827	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 8,064 bps, Translation length: 2,649 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BYK8

CCDS

This transcript is a member of the Human CCDS set: CCDS33508

Version

ENST00000467148.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000354127 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000467148.1 HELZ2-003

Summary