Transcript: ENST00000534359.1 CHRNA10-003

Description

cholinergic receptor, nicotinic, alpha 10 (neuronal) [Source:HGNC Symbol;Acc:13800]

Gene Synonyms

NACHRA10

Location

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 3076 variant alleles and maps to 267 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000250699.2	CHRNA10-001	1945	450aa	ENSP00000250699.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7745	Q9GZZ6	NM_020402.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534359.1	CHRNA10-003	1474	123aa	ENSP00000437107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNX2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526599.1	CHRNA10-004	1541	96aa	ENSP00000432757.1	Nonsense mediated decay		E9PNT7	-	-
ENST00000493827.2	CHRNA10-002	1005	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 1,474 bps, Translation length: 123 residues

Version

ENST00000534359.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000392912 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.