Transcript: ENST00000250699.2 CHRNA10-001

Description

cholinergic receptor, nicotinic, alpha 10 (neuronal) [Source:HGNC Symbol;Acc:13800]

Gene Synonyms

NACHRA10

Location

About this transcript

This transcript has 5 exons, is annotated with 29 domains and features, is associated with 3267 variant alleles and maps to 343 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000250699.2	CHRNA10-001	1945	450aa	ENSP00000250699.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7745	Q9GZZ6	NM_020402.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534359.1	CHRNA10-003	1474	123aa	ENSP00000437107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNX2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526599.1	CHRNA10-004	1541	96aa	ENSP00000432757.1	Nonsense mediated decay		E9PNT7	-	-
ENST00000493827.2	CHRNA10-002	1005	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,945 bps, Translation length: 450 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9GZZ6

CCDS

This transcript is a member of the Human CCDS set: CCDS7745

Version

ENST00000250699.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000032763 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.