Transcript: ENST00000379638.4 REEP5-001

Description

receptor accessory protein 5 [Source:HGNC Symbol;Acc:30077]

Gene Synonyms

C5orf18, D5S346, DP1, TB2, YOP1

Location

Chromosome 5: 112,212,084-112,258,236 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 22863 variant alleles and maps to 547 oligo probes.

Gene

This transcript is a product of gene ENSG00000129625.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379638.4	REEP5-001	3318	189aa	ENSP00000368959.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4109	Q00765	NM_005669.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545426.1	REEP5-201	1187	131aa	ENSP00000442940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z681	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513339.1	REEP5-007	1139	122aa	ENSP00000425901.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z510	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000261482.4	REEP5-004	683	165aa	ENSP00000261482.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E2QRG8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504247.1	REEP5-008	480	99aa	ENSP00000421881.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z332	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511865.2	REEP5-006	1187	145aa	ENSP00000421305.2	Nonsense mediated decay		B7Z681	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000474542.2	REEP5-003	650	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497856.2	REEP5-002	1779	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,318 bps, Translation length: 189 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q00765

CCDS

This transcript is a member of the Human CCDS set: CCDS4109

Version

ENST00000379638.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250739 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000379638.4 REEP5-001

Summary