Transcript: ENST00000250495.5 NEDD8-001

Description

neural precursor cell expressed, developmentally down-regulated 8 [Source:HGNC Symbol;Acc:7732]

Gene Synonyms

NEDD-8, Nedd-8

Location

Chromosome 14: 24,686,058-24,701,660 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 13 domains and features, is associated with 7370 variant alleles and maps to 383 oligo probes.

Gene

This transcript is a product of gene ENSG00000129559.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000250495.5	NEDD8-001	708	81aa	ENSP00000250495.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9621	F8VSA6 Q15843	NM_006156.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524927.1	NEDD8-004	653	50aa	ENSP00000448192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VSA6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396828.4	NEDD8-002	626	50aa	ENSP00000380040.4	Nonsense mediated decay		F8VSA6	-	-
ENST00000533242.1	NEDD8-003	2300	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527046.1	NEDD8-005	847	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531430.1	NEDD8-006	651	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526430.1	NEDD8-007	286	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560427.1	NEDD8-008	654	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 708 bps, Translation length: 81 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15843

CCDS

This transcript is a member of the Human CCDS set: CCDS9621

Version

ENST00000250495.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000073146 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000250495.5 NEDD8-001

Summary