Transcript: ENST00000397002.2 NRL-002

Description

neural retina leucine zipper [Source:HGNC Symbol;Acc:8002]

Gene Synonyms

D14S46E, NRL-MAF, RP27

Location

Chromosome 14: 24,549,316-24,553,834 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 13 domains and features, is associated with 2191 variant alleles and maps to 346 oligo probes.

Gene

This transcript is a product of gene ENSG00000129535.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000561028.1	NRL-004	2103	237aa	ENSP00000454062.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9608	A8MX14 H0YNW2 P54845	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397002.2	NRL-002	1976	237aa	ENSP00000380197.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9608	A8MX14 H0YNW2 P54845	NM_006177.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396997.1	NRL-003	1517	237aa	ENSP00000380193.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9608	A8MX14 H0YNW2 P54845	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396995.1	NRL-001	810	98aa	ENSP00000380191.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MX14	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560550.1	NRL-006	788	98aa	ENSP00000452966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MX14	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558280.1	NRL-005	737	65aa	ENSP00000454180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNW2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,976 bps, Translation length: 237 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P54845

CCDS

This transcript is a member of the Human CCDS set: CCDS9608

Version

ENST00000397002.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000071891 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000397002.2 NRL-002

Summary