Transcript: ENST00000526029.1 KCNC1-003

Description

potassium voltage-gated channel, Shaw-related subfamily, member 1 [Source:HGNC Symbol;Acc:6233]

Gene Synonyms

KV3.1, KV4, Kv3.1, NGK2

Location

About this transcript

This transcript has 2 exons, is associated with 1792 variant alleles and maps to 111 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265969.6	KCNC1-002	3887	585aa	ENSP00000265969.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44547	K4DI87	NM_001112741.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379472.3	KCNC1-001	6766	511aa	ENSP00000368785.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7827	P48547	NM_004976.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525802.1	KCNC1-004	525	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526029.1	KCNC1-003	1859	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,859 bps,

Version

ENST00000526029.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000389391 (version 1)