Transcript: ENST00000525090.1 BBOX1-004

Description

butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 [Source:HGNC Symbol;Acc:964]

Gene Synonyms

BBH, BBOX, G-BBH, gamma-BBH

Location

Chromosome 11: 27,076,764-27,149,218 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 7 domains and features, is associated with 29735 variant alleles and maps to 420 oligo probes.

Gene

This transcript is a product of gene ENSG00000129151.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263182.3	BBOX1-201	1886	387aa	ENSP00000263182.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7862	E9PKC9 O75936 Q1KLS6	NM_003986.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529202.1	BBOX1-001	1725	387aa	ENSP00000435781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7862	E9PKC9 O75936 Q1KLS6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528583.1	BBOX1-002	1724	387aa	ENSP00000434918.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7862	E9PKC9 O75936 Q1KLS6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525090.1	BBOX1-004	1596	387aa	ENSP00000433772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7862	E9PKC9 O75936 Q1KLS6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533566.1	BBOX1-006	703	68aa	ENSP00000435369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKC9 Q1KLS6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527505.1	BBOX1-008	618	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531832.1	BBOX1-005	457	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534323.1	BBOX1-007	457	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,596 bps, Translation length: 387 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75936

CCDS

This transcript is a member of the Human CCDS set: CCDS7862

Version

ENST00000525090.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000387950 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000525090.1 BBOX1-004

Summary