Transcript: ENST00000503362.1 SPCS3-001

Description

signal peptidase complex subunit 3 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:26212]

Gene Synonyms

FLJ22649, PRO3567, SPC22, SPC22/23, SPC3, YLR066W

Location

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 5301 variant alleles and maps to 458 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000503362.1	SPCS3-001	4571	180aa	ENSP00000427463.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54823	P61009	NM_021928.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507001.1	SPCS3-004	478	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507678.1	SPCS3-002	2655	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000513139.1	SPCS3-003	589	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 4,571 bps, Translation length: 180 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P61009

CCDS

This transcript is a member of the Human CCDS set: CCDS54823

Version

ENST00000503362.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000362329 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.