Transcript: ENST00000487220.1 CHAC1-002

Description

ChaC, cation transport regulator homolog 1 (E. coli) [Source:HGNC Symbol;Acc:28680]

Gene Synonyms

BOTCH, MGC4504

Location

About this transcript

This transcript has 2 exons, is annotated with 2 domains and features, is associated with 999 variant alleles and maps to 221 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000446533.3	CHAC1-001	1842	264aa	ENSP00000398105.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10070	H0YK90 Q9BUX1	NM_024111.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444189.2	CHAC1-003	1204	219aa	ENSP00000395466.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45233	H0YK90 Q9BUX1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000487220.1	CHAC1-002	853	37aa	ENSP00000452707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK90	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 853 bps, Translation length: 37 residues

Version

ENST00000487220.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000347784 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.