Transcript: ENST00000449187.2 CALU-002

Description

calumenin [Source:HGNC Symbol;Acc:1458]

Location

Chromosome 7: 128,379,417-128,410,630 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 25 domains and features, is associated with 13110 variant alleles and maps to 587 oligo probes.

Gene

This transcript is a product of gene ENSG00000128595.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000542996.2	CALU-005	4225	323aa	ENSP00000438248.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56507	O43852	NM_001199672.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535623.1	CALU-201	4418	147aa	ENSP00000439139.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O43852	NM_001199671.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000249364.4	CALU-001	3357	315aa	ENSP00000249364.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5805	O43852 Q6IAW5	NM_001219.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535011.2	CALU-006	3210	224aa	ENSP00000442110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56508	O43852	NM_001199673.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538546.1	CALU-202	2983	164aa	ENSP00000438994.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O43852	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479257.1	CALU-003	2572	323aa	ENSP00000420381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56506	O43852 Q6IAW5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449187.2	CALU-002	2438	315aa	ENSP00000408838.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47703	O43852	NM_001130674.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493278.1	CALU-004	589	147aa	ENSP00000417973.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,438 bps, Translation length: 315 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43852

CCDS

This transcript is a member of the Human CCDS set: CCDS47703

Version

ENST00000449187.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000350534 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000449187.2 CALU-002

Summary