Transcript: ENST00000249016.4 MCHR1-001

Description

melanin-concentrating hormone receptor 1 [Source:HGNC Symbol;Acc:4479]

Gene Synonyms

GPR24, MCH-1R, MCH1R, SLC-1, SLC1

Location

About this transcript

This transcript has 2 exons, is annotated with 37 domains and features, is associated with 2268 variant alleles and maps to 454 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000249016.4	MCHR1-001	2851	422aa	ENSP00000249016.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14004	Q5IFI4 Q99705	NM_005297.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381433.2	MCHR1-003	1219	296aa	ENSP00000370841.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6ZJ87	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498400.1	MCHR1-002	1267	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465662.1	MCHR1-004	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,851 bps, Translation length: 422 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99705

CCDS

This transcript is a member of the Human CCDS set: CCDS14004

Version

ENST00000249016.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000317142 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.