Transcript: ENST00000400237.1 RFPL2-001

Description

ret finger protein-like 2 [Source:HGNC Symbol;Acc:9979]

Gene Synonyms

RNF79

Location

Chromosome 22: 32,586,425-32,599,464 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 19 domains and features, is associated with 5878 variant alleles and maps to 461 oligo probes.

Gene

This transcript is a product of gene ENSG00000128253.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000400237.1	RFPL2-001	2407	378aa	ENSP00000383096.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43009	O75678	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400236.3	RFPL2-203	2410	288aa	ENSP00000383095.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54521	O75678	NM_001098527.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000248980.4	RFPL2-201	1496	317aa	ENSP00000248980.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46694	O75678	NM_006605.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000248983.4	RFPL2-202	1452	288aa	ENSP00000248983.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54521	O75678	NM_001159545.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489846.1	RFPL2-002	1149	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,407 bps, Translation length: 378 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75678

CCDS

This transcript is a member of the Human CCDS set: CCDS43009

Version

ENST00000400237.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000075262 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000400237.1 RFPL2-001

Summary