Transcript: ENST00000380889.6 PIN1-004

Description

peptidylprolyl cis/trans isomerase, NIMA-interacting 1 [Source:HGNC Symbol;Acc:8988]

Gene Synonyms

DOD, UBL5, dod

Location

Chromosome 19: 9,946,119-9,960,357 forward strand.

About this transcript

This transcript has 6 exons, is associated with 6590 variant alleles and maps to 369 oligo probes.

Gene

This transcript is a product of gene ENSG00000127445.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000247970.4	PIN1-001	997	163aa	ENSP00000247970.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12220	Q13526 Q8NFL2	NM_006221.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587625.1	PIN1-007	878	145aa	ENSP00000466656.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMU7 Q8NFL2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000588695.1	PIN1-008	648	163aa	ENSP00000466962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12220	Q13526 Q8NFL2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586352.1	PIN1-010	755	50aa	ENSP00000467197.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000591777.1	PIN1-013	533	90aa	ENSP00000466780.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000380889.6	PIN1-004	1670	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000585442.1	PIN1-011	705	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000590540.1	PIN1-009	702	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000589058.1	PIN1-012	536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000592184.1	PIN1-006	517	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000586025.1	PIN1-005	4022	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,670 bps,

Version

ENST00000380889.6

Type

Processed transcript

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000451116 (version 1)

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Transcript: ENST00000380889.6 PIN1-004

Summary