Transcript: ENST00000474950.1 TRAF2-004

Description

TNF receptor-associated factor 2 [Source:HGNC Symbol;Acc:12032]

Gene Synonyms

MGC:45012, TRAP, TRAP3

Location

Chromosome 9: 139,794,932-139,804,548 forward strand.

About this transcript

This transcript has 3 exons, is associated with 5785 variant alleles and maps to 110 oligo probes.

Gene

This transcript is a product of gene ENSG00000127191.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000247668.2	TRAF2-007	2264	501aa	ENSP00000247668.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7013	B1AMX7 B1AMX8 B1AMY1 Q12933	NM_021138.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359662.3	TRAF2-201	2413	553aa	ENSP00000352685.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AMY1 Q12933	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536468.1	TRAF2-202	1789	501aa	ENSP00000446414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7013	B1AMX7 B1AMX8 B1AMY1 Q12933	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429509.1	TRAF2-002	823	193aa	ENSP00000406524.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AMX7 B1AMX8 B1AMY1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000419057.1	TRAF2-008	709	171aa	ENSP00000405860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AMX7 B1AMY1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000414589.1	TRAF2-009	680	121aa	ENSP00000397653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AMY1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000482854.1	TRAF2-003	852	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474950.1	TRAF2-004	380	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469701.1	TRAF2-005	308	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466107.1	TRAF2-006	233	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 380 bps,

Version

ENST00000474950.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000055163 (version 1)

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Transcript: ENST00000474950.1 TRAF2-004

Summary