Transcript: ENST00000494669.2 FGD3-005

Description

FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:16027]

Gene Synonyms

FLJ00004, ZFYVE5

Location

Chromosome 9: 95,736,782-95,738,989 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1012 variant alleles and maps to 85 oligo probes.

Gene

This transcript is a product of gene ENSG00000127084.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375482.3	FGD3-001	3321	725aa	ENSP00000364631.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43849	B4DXH4 Q5JSP0	NM_001083536.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000337352.6	FGD3-201	3303	725aa	ENSP00000336914.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43849	B4DXH4 Q5JSP0	NM_033086.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000416701.2	FGD3-202	3221	724aa	ENSP00000413833.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS69619	F8W7P2	NM_001286993.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538555.1	FGD3-203	1342	328aa	ENSP00000442560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DXH4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467786.1	FGD3-002	4697	634aa	ENSP00000432310.1	Nonsense mediated decay		Q5JSP0	-	-
ENST00000468206.1	FGD3-006	918	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494669.2	FGD3-005	915	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488407.1	FGD3-003	462	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494553.1	FGD3-004	244	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 915 bps,

Version

ENST00000494669.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000055497 (version 2)

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Transcript: ENST00000494669.2 FGD3-005

Summary