Transcript: ENST00000316754.3 RHOJ-001

Description

ras homolog family member J [Source:HGNC Symbol;Acc:688]

Gene Synonyms

ARHJ, FLJ14445, RASL7B, RHOI, TC10B, TCL

Location

About this transcript

This transcript has 5 exons, is annotated with 15 domains and features, is associated with 35555 variant alleles and maps to 720 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316754.3	RHOJ-001	3302	214aa	ENSP00000316729.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9757	Q9H4E5	NM_020663.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555125.1	RHOJ-005	548	178aa	ENSP00000451643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V476	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557447.1	RHOJ-003	1837	153aa	ENSP00000451796.1	Nonsense mediated decay		G3V4H1	-	-
ENST00000557133.1	RHOJ-004	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,302 bps, Translation length: 214 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H4E5

CCDS

This transcript is a member of the Human CCDS set: CCDS9757

Version

ENST00000316754.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000276975 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.