Transcript: ENST00000591016.1 UBA2-009

Description

ubiquitin-like modifier activating enzyme 2 [Source:HGNC Symbol;Acc:30661]

Gene Synonyms

ARX, FLJ13058, HRIHFB2115, SAE2, UBLE1B

Location

Chromosome 19: 34,941,189-34,955,024 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 6975 variant alleles and maps to 130 oligo probes.

Gene

This transcript is a product of gene ENSG00000126261.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000246548.4	UBA2-001	2720	640aa	ENSP00000246548.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12439	B3KWB9 Q9UBT2 U3KQ93	NM_005499.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439527.2	UBA2-003	2802	544aa	ENSP00000437484.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KWB9 U3KQ93	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000592791.1	UBA2-008	910	166aa	ENSP00000475656.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQ93	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590048.2	UBA2-005	847	262aa	ENSP00000467433.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EPL2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000591016.1	UBA2-009	646	215aa	ENSP00000468756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000586313.1	UBA2-002	1458	74aa	ENSP00000468538.1	Nonsense mediated decay		K7ES38	-	-
ENST00000607361.1	UBA2-012	754	54aa	ENSP00000475565.1	Nonsense mediated decay		U3KQ55	-	-
ENST00000588585.1	UBA2-007	171	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000592672.2	UBA2-004	353	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000592841.1	UBA2-011	344	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 646 bps, Translation length: 215 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000591016.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000459378 (version 1)

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Transcript: ENST00000591016.1 UBA2-009

Summary