Transcript: ENST00000245816.4 CLPP-001

Description

caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:HGNC Symbol;Acc:2084]

Gene Synonyms

PRLTS3

Location

Chromosome 19: 6,361,463-6,368,919 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 15 domains and features, is associated with 3983 variant alleles and maps to 400 oligo probes.

Gene

This transcript is a product of gene ENSG00000125656.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000245816.4	CLPP-001	1155	277aa	ENSP00000245816.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12162	A4UCS4 M0R208 Q16740	NM_006012.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596149.1	CLPP-005	745	190aa	ENSP00000472227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R208	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000596605.1	CLPP-004	646	56aa	ENSP00000469124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QXE9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000597326.1	CLPP-006	480	160aa	ENSP00000470098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QYV5	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000596070.1	CLPP-003	1346	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000594780.1	CLPP-002	1007	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,155 bps, Translation length: 277 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16740

CCDS

This transcript is a member of the Human CCDS set: CCDS12162

Version

ENST00000245816.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000452984 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000245816.4 CLPP-001

Summary